Bioinformatics · Phase 29
Epitope Clustering & Redundancy Analyzer
Group overlapping or sequence-similar peptide epitopes into connected clusters, identify representative sequences and expose exact shared cores before selecting a non-redundant vaccine or assay panel.
Epitope set
Peptide epitopes
Load sample Cluster epitopes
Ready for analysis.
Clustering logic best ungapped overlap for each peptide pair minimum overlap length + overlap fraction identity threshold applied to the qualifying overlap connected-component / single-linkage clusters representative chosen by highest mean within-cluster identity longest exact shared core shown when present Redundancy analysis only. Sequence clustering does not rank immunogenicity, MHC binding, protection or clinical relevance.
Cluster summary Rank Size Representative Sequence Mean pair identity % Shared exact core Members