Protein Sequence Analyzer

Calculate core sequence-derived protein properties and inspect amino-acid composition and motifs.

Protein / FASTA input

Motif search (optional)

Research-use note: Properties are sequence-derived estimates. Molecular weight assumes an unmodified neutral protein; pI and charge are theoretical approximations and do not model post-translational modifications or solution-specific effects.

Protein motif & feature scan

Search custom motifs and inspect transparent sequence-level feature heuristics.

Open Protein Motif & Feature Scanner

Protein physicochemical properties

Calculate molecular weight, estimated pI, charge, composition and mean hydropathy.

Open Protein Physicochemical Properties Analyzer

Protein Domain & Functional Annotation

Analyze protein signatures and integrated InterPro annotations with InterProScan while preserving source and coordinates.

Open Protein Domain Annotation