Phase 64 · DNA & RNA Tools
Circular DNA / Minicircle QC & Integrity
Run deterministic sequence QC on a circular-DNA/minicircle candidate, including CpG statistics, repeats, homopolymers, exact expected-component checks, user-defined motif screens and circular-origin-aware matching.
Circular DNA sequence or FASTA
Expected components — optional FASTA
User-defined motifs — optional, one per line as label:SEQUENCE
Load demo Run circular DNA QC
Ready.
QC scope GC%, CpG count and CpG/kb. Longest homopolymer and repeated 12-mer candidates. Exact expected-component presence and multiplicity. User-defined exact motif screen. Matches can cross the displayed circular origin. CpG count and motif presence are descriptive sequence metrics, not predictions of immune response, expression, safety or therapeutic performance.
QC result
Expected component Length Status Start position(s)
User-defined motif screen Motif Sequence Count Start position(s)
Circular junction